BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB025C03SP1|AL428348
(882 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1074 1724 0.0
>3x_Contig1074
Length = 4572
Score = 1724 bits (869), Expect = 0.0
Identities = 876/877 (99%), Gaps = 1/877 (0%)
Strand = Plus / Minus
Query: 1 ctgaaaaccgtatctagtattctacgaaagatccaagatggagtatagtaggaaaaatat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 996 ctgaaaaccgtatctagtattctacgaaagatccaagatggagtatagtaggaaaaatat 937
Query: 61 gcatatagtttggcctttcctggggtgtaa-gactcttagggttttcggttttgataact 119
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 936 gcatatagtttggcctttcctggggtgtaacgactcttagggttttcggttttgataact 877
Query: 120 ttcaacacttctttggcaatgacttctggctcatcagaattttcgaggctttgcttgagc 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 876 ttcaacacttctttggcaatgacttctggctcatcagaattttcgaggctttgcttgagc 817
Query: 180 attctttccgacactttacccttgattgaatcatatacggccatttcttcatctgcagga 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 816 attctttccgacactttacccttgattgaatcatatacggccatttcttcatctgcagga 757
Query: 240 gaatttgaattagccatacctgttttgataatatgtggatctatagtactgacgtgaatt 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 756 gaatttgaattagccatacctgttttgataatatgtggatctatagtactgacgtgaatt 697
Query: 300 ccgaactttttcacctcgtaatcaagagactcagtgtacccttctaaagcatgtttagac 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 696 ccgaactttttcacctcgtaatcaagagactcagtgtacccttctaaagcatgtttagac 637
Query: 360 gaacagtaaagagcaccgtatgggattggcataataccacccattgaacttatattgatt 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 636 gaacagtaaagagcaccgtatgggattggcataataccacccattgaacttatattgatt 577
Query: 420 attttaccgtgtctttgctctctcatatgaggtaacacagcacgggtcatccgatggaca 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 attttaccgtgtctttgctctctcatatgaggtaacacagcacgggtcatccgatggaca 517
Query: 480 ccaaagaaattcgtttcgaaaatggtttttgctagatcagttgaacattcttctactgct 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 ccaaagaaattcgtttcgaaaatggtttttgctagatcagttgaacattcttctactgct 457
Query: 540 gcccatttaaacgcaatgccagcattgttaactagaacatcaattcttccagctttttcg 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 gcccatttaaacgcaatgccagcattgttaactagaacatcaattcttccagctttttcg 397
Query: 600 ataacttcgttcacagcacttttgaccgattcctcgtcggtaatatctagcttgatcatc 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 ataacttcgttcacagcacttttgaccgattcctcgtcggtaatatctagcttgatcatc 337
Query: 660 ttgaaggagtattccttcccaggaatggacccttttctagaggtaccgaaaacttcataa 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 ttgaaggagtattccttcccaggaatggacccttttctagaggtaccgaaaacttcataa 277
Query: 720 cctgcactccgtaacgtttctgctattgacagcccgattccagttgatgcaccggtaatt 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 cctgcactccgtaacgtttctgctattgacagcccgattccagttgatgcaccggtaatt 217
Query: 780 aagatcacttgctttttcatctggttttaacgtatgctgtcaccgattttcgacagcgat 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 aagatcacttgctttttcatctggttttaacgtatgctgtcaccgattttcgacagcgat 157
Query: 840 atttcgatattggtttaacttgtaggcagtgctaact 876
|||||||||||||||||||||||||||||||||||||
Sbjct: 156 atttcgatattggtttaacttgtaggcagtgctaact 120
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5941
Number of Sequences: 1807
Number of extensions: 5941
Number of successful extensions: 39
Number of sequences better than 1.0e-20: 1
length of query: 882
length of database: 10,358,551
effective HSP length: 16
effective length of query: 866
effective length of database: 10,329,639
effective search space: 8945467374
effective search space used: 8945467374
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)